The molecular basis of microbial adaptation

 

Horizontal gene transfer system in Acinetobacter baylyi

Microbial life has been detected in virtually every environment on earth ranging from hydrothermal vents, salt-saturated alkaline ponds, acidic hot springs, antarctic ice, dry dessert soils, the upper atmosphere, and in animal and plant hosts. To exploit such different environments, microorganisms must have evolved phenotypic traits allowing survival under very different environmental conditions. Data obtained in studies of molecular microbial ecology and genome analyses provide growing evidence that horizontal gene transfer is a major force for bacterial adaptation to changing environments.

 

Despite the important impact of DNA transfer in evolution, information on the structure and function of DNA translocators is limited. Acinetobacter baylyi (former Acinetobacter sp. BD413)  is very well known for its extraordinary trait to take up large amounts of free DNA even from members of other domains of life (e.g. horizontal gene transfer). To understand the mechanism of natural transformation and elucidate structure of the DNA translocator we combined modern molecular, physiological, biochemical, immunological, and electron microscopical methods. These studies led to the identification the first set of subunits of the A. baylyi transformation machinery. Interestingly several of the proteins are very similar to components implicated in the biogenesis of type IV pili, dynamic structures which are essential for host cell adhesion and motility on solid surfaces of pathogenic bacteria and raised the question of an implication of the Acinetobacter pili in DNA translocation. This question has been answered clearly, since we showed that the Acinetobacter pili are not linked to DNA transport. Our molecular, biochemical, and electron microscopical studies have culminated in the first model of the A. baylyi DNA translocator. Further studies are underway to identify novel genes of the DNA translocator, analyze their function and interactions and to understand the broad substrate specificity of the A. baylyi DNA translocator.

The DNA translocator of A. baylyi.

 

 

References

Averhoff, B. (2008) The natural transformation system of Acinetobacter baylyi: A unique transport machinery. In: Acinetobacter Molecular Biology, Gerischer U (ed.) pp 119-139, Caister Academic Press, Norfolk, UK.

 

Averhoff, B.(2004) DNA transport and natural transformation in mesophilic and thermophilic bacteria. J. Bioenerg. Biomembr. 36 : 25–33.

 

Gohl, O., Friedrich, A. and Averhoff, B. (2004) Identification of two novel pili assembly systems in Acinetobacter sp. BD413 both unrelated to natural transformation. Appl. Environ. Microbiol. 72: 1394-1401.

 

Averhoff, B., Friedrich, A.(2003)Type IV pili-related natural transformation systems: DNA transport in mesophilic and thermophilic bacteria. Arch. Microbiol. 18 : 385-393.

 

Friedrich, A., Hartsch, T., Averhoff, B.(2001) Natural transformation in mesophilic and thermophilic bacteria: identification and characterization of closely related ComA-like competence factors in Acinetobacter sp. BD413 and Thermus thermophilus HB27. Appl. Environ. Microbiol. 67 : 3140-3148.

 

Herzberg, C.,  Friedrich, A. and Averhoff, B. (2000) comB, a novel competence gene required for natural transformation of Acinetobacter sp. BD413: identification, characterization and analysis of growth phase-dependent regulation. Arch. Microbiol. 173 : 220-228.

 

Porstendörfer, P., Gohl, O, Mayer, F. and Averhoff, B. (2000) ComP, a pilin-like protein essential for natural competence in Acinetobacter sp. BD413: regulation, modification by glycosylation, and cellular localization. J. Bacteriol. 182 : 3673-3680.

  

Busch, S., Rosenplänter, C. and Averhoff, B. (1999) Identification and characterization of comE and comF, two novel pilin-like competence factors involved in natural transformation of Acinetobacter sp. BD413. Appl. Environ. Microbiol. 65 : 4568-4574.

 

Link, C., Eickernjäger, S., Porstendörfer, D., Averhoff, B.(1998) Identification and characterization of a novel competence gene, comC, required for DNA binding and uptake in Acinetobacter sp. strain BD413. J. Bacteriol. 180 : 1592 - 1595.

 

Porstendörfer, D., Drotschmann, U., Averhoff, B.(1997) A novel competence gene, comP, is essential for natural transformation of Acinetobacter sp. BD413. Appl. Environ. Microbiol. 63 : 4150 - 4157.